Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAAMVPGRSESWERGEPGRPALYFCGSIRGGREDRTLYERIVSRLRRFGTVLTEHVAAAELGARGEEAAGGDRLIHEQDLEWLQQADVVVAEVTQPSLGVGYELGRAVAFNKRILCLFRPQSGRVLSAMIRGAADGSRFQVWDYEEGEVEALLDRYFEADPPGQVAASPDPTT
4FYH Chain:A ((2-142))-------------------RRSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTE---------------GGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEA--------------


General information:
TITO was launched using:
RESULT:

Template: 4FYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 544 -80197 -147.42 -636.48
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -147.42
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_4FYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4fyh-query.scw
PDB file : Tito_Scwrl_4FYH.pdb: