Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNKQTLSYDEETRGKTVINHMGGVFLYNRPEQILEQYEL----EVKSISRGRDSYQCDTEQGPKILREY--RGSKERAGFLADMLDHLSGQGRTVETVMRTKEGEPFSVNEEETKYILYQAFPGAECDTKNRADMLSAV-RELALLHQSAQNYEGSVPEFLKSGQNNLLLLYEKRNRELNKVRNYIRAKKKKNDFEMMFAVWYPEYVKKAQETTDILKDLGIQEQLIGFCHGDYNQHNVIFSRE---GIAVVHFE-NFLYQESVGDLANFIRKMMEKNN-WNAGLGMDLIRGYDRVRKLSPEELKYLYVYLAYPEKFWKIANRYYNSHKAWLSGRNIEKLEKVVAQEDAREQFLQMLFHFTV 2PPQ Chain:A ((16-311)) ---------------------------------LTQYDVGSLTSYKGIAE-NSNFLLHTTKDPLILTLYEK---KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGE--LLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSV--DGWKVLWDKSEERADEVEKGLR-EEIRPEIDYLAAHWP--------------KDLP-----AGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLN--AWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPL-LSRGSALRFFLTRLYD----WLT----TPAGALVVKKDPLEYLRKLRFHRTI

General information: TITO was launched using: RESULT: Template: 2PPQ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1283 48702 37.96 175.19 target 2D structure prediction score : 0.46 Monomeric hydrophicity matching model chain A : 0.70 3D Compatibility (PKB) : 37.96 2D Compatibility (Sec. Struct. Predict.) : 0.46 1D Compatibility (Hydrophobicity) : 0.70 QMean score : 0.302

(partial model without unconserved sides chains): PDB file : Tito_2PPQ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2ppq-query.scw PDB file : Tito_Scwrl_2PPQ.pdb: