Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRNKQKSKDYQSFLKNRHDKLNTSDDVLEKIVKNAVGYGIKDKQKIVEGEINEVYDITPTKGDNLIVRVSREEHNRFEAEKWALDNCRNAGVSVPQIILLDEVETDKEKLHICVENKIEGVSLQELIKQKVLSQSEIKDLTISAGEILSKIHSI---KAKNFGEINSLGVGKFETWPEYMLEQNKNSDIVLEKAKNISIDPKLIQQAIEILEKTQDMYMNVDSRLAHSDYGIKHMLIHEGKINGIIDFENCKSSDIAYDFS---YWNYFGKNRPSVEWLMEGYKSNGNFGENFEARMHLVKIKIALSLLIYYSDAGHGFAKEITTNNLIEDITFFNYVK
3W0N Chain:A ((22-236))----------------------------------------VSDLMQLSEGEESRAFSFD-VGGRGYVLRVN-SCADGFYKDRYVYRHFASAALPIPEVLDIGEF---SESLTYCISRRAQGVTLQDL------PETELPAVLQPVAEVMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLWAEDC--PEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDPLYEVANIFFWR------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 877 -41525 -47.35 -198.68
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -47.35
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_3W0N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0n-query.scw
PDB file : Tito_Scwrl_3W0N.pdb: