Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYQWEPQQTLEPPLALELIREQFPDLSPVQIRVLGAGWDNTAFVINEDLIFRFPRREIAVPLLEAEWCILPKLAPRLPLPIPIPKWRGSPASRFPWPFIGYKMLPGFTACYANLSEREREA---LAQPIARFLSHLHATPRSIISGCQIPGDNQGRIDWKQLMPKIRKNIEELSLLSL----LEKRNEL-EALLESLQNLRPPMASIVVHGDFYVRHILVD-EIHHFAGVIDWGDIHLGDPAIDLSVAHSFLPFCAHEKFREAYGEISTDTWSLALLRAIYSSTLLVLYGHHSKDPVILREGLRSLKIMVGK
4N57 Chain:A ((33-250))-------------------IEQLYPDFTINTIQISGKGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSIN---ISGFK----SNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILEN--EIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4N57.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 789 -51213 -64.91 -245.04
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -64.91
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.352

(partial model without unconserved sides chains):
PDB file : Tito_4N57.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4n57-query.scw
PDB file : Tito_Scwrl_4N57.pdb: