Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTYFELSDDFENIIKNTLNDKQIISIKQNPTGWTNIVYEVETNEGNFFFRFPRDEFWSRTIVKDYEFAKYIYG------KTNFDTVKLELFYDNDR-PFSVHKKISGIPLA-EVMNDLSSDEVKTISDEIAKFMYQLHCLDFKESKIFSINNIGLNLTDFLDELLNVHVDKND---------MNFWIPTAIHSDDICLVHGDLNSSNVLLDENRHVAAIIDFGFGGFGNKYNDIGRIIGRCPTSFKNEIINSYEQYSNSKLDSKLLDTNINTWTDIDNSYINYMRTIGIYK
5BYL Chain:A ((18-231))--------------LIEHYFDNFKVDSIEIIGSGYDSVAYLV-NNEYIFKTKFSTN--------KGYAKEKAIYNFLNTNLETNVKIPNIEYSYISDELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNKQNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDGNNRLTGIIDFGDSGIIDEYCD----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5BYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 598 -27577 -46.12 -141.42
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -46.12
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.305

(partial model without unconserved sides chains):
PDB file : Tito_5BYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5byl-query.scw
PDB file : Tito_Scwrl_5BYL.pdb: