Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------MDIQTVLSDLKLNGKVIPVVGGDVNQTYRIKTEHRAYFLKIHPNVKKGFFEAEVDGLKELSAFV-RVPDTYM------LGETSEGAYLLMEWI-----EPGKGDQRDLA-AALANLHQQTA---PQFGFRKDNYLG---TLVQKNSFE-EDWWT-FFFKDRLESQISLAEETNRWNVQRQEKYLRFKE-RVLKSVEPKKITPRLLHGDLWSGNVFFDQQGHPVFVD-PAVSYGNREQDIAM--------SQLFGGFRPEF-LDAYQTIFPLEKGWKDR-LPI-YQLYYLLAHLNMFGESYGSQVDQLLENF---------------
2Q83 Chain:A ((11-346))LSAEDAKKLTELAENVLQGWDVQAEKIDVIQ---ALVWKVHTDSGAVCLKRIHR-PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTGVWDDETFNVMLNAYESRAPLTEEQKQVMFIDMLFPYELYDVIREKYVRKSALPKEELESAFEYERIKANALRQLI


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1052 40202 38.21 147.26
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 38.21
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.337

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: