Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVNNTPHHLAALADAAVPGLRPVDLHMVAENIGERFHVGFVVDDEERAWVVRLPADRVSAALQEASIPFLLEVGRHL--PFDVPQPAGTAALGDGRPAMVYPYLYGRIVDFALL-----PPGPGIATGIGAALAALHDVPVGALDDTGVPVYDAQECRHRLVSDVDRGART-GLVPTQLLTRWERTLDDASWWDFTTVPVHGYLSNAHLLTDFPTEDTSSGRVSAIVSWEGAKIGDPAEDLAAIARS----APPEAVDTVFGAYAQHRRGTVDPHLRERARLLGELRLLSRLLAAHSSGDEPAVAHVVRTMRRLVDLLADDTLAPSTSTVRTAVPVTFEDEPVDEDWYSSGATLPGGNPRIDVTGAGSDAEDGGRSSTGETTYAGAVPEETPHGSGGDGDLRGPDTYRG
5IQI Chain:C ((9-299))---ATNVKAMKYLIEHYFDNFKVDSIEII--GSGYDSVAYLVN----NEYIFKTKFSTNKKKGFAKEKAIYNFLNTNLETNVKIPNIEYSYIS-DELSILGYKEIKGTFLTPEIYSTMSEEEQNLLKRDIASFLRQMHGLDYTDISECTIDNK--QNVLEEYILLRETIYNDLTDIEKDYIESFMERLNATTVFEGKKCLCHNDFSCNHLLLDG------NNRLTGIIDFGDSGIIDEYCDFIYLLEDSEEEIGTNFGEDILRMYGNI----DIEKAKEYQDIVEEYYPIETIVYGIKNIKQEFIENGRKEIY-------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1229 -45545 -37.06 -163.24
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -37.06
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.294

(partial model without unconserved sides chains):
PDB file : Tito_5IQI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iqi-query.scw
PDB file : Tito_Scwrl_5IQI.pdb: