Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHPTPSPDTILFASHTTATAASVAQWVERHYDLP-VQQCYLIRRNLNDNYAVRAADGSRYVARLCAIRPRGPFNVDFEVALLAHLEA-QGVGVASPVLAANGATSVALPF--PEGPRVLVLFRHCEGSVPD----TPEDLHLTGATLAQIHSAAQSYTGPA--SRYVLDGHHLAGRTLDYLAAHPELA---PSVLDAYRELIHRLLGELANV-EDTLTRVMCHGDTHGFNNHVYSD---AEGARRAAFFDFDDAGPGFLAYDLCVWLWSNLPRKAPMEPDEALLQRWQQYLAGYRAGGGHVTDADLAALPLFVQLRHLWNMGEGVARIHHWGANMMSVDWIKKQLEVMAAWARLDLPA
6EF6 Chain:A ((27-323))-------------------DVTIAQQALTHYDVSDNASLRLLNLSENATYLVE-DGEHQSILRVHRQDYHQPHEIESELDWLAALRTDSDVTVPTVVPARDGRRVVTVDPAD--VPRHVVHFEMVGGAEPDEESLTLDDFQTLGRITASLHEHSQRWTRPAGFGRFSWDWEHCLGDT-PRWGRWQDAEGVGASETALLTRAQDLLHRKLEEYGSGPDRYGLIHADLRLANLLVDSSTPQR----TITVIDFDDCGFGWYFYDFGTAVSFIEHD-------PRLGEWQESWVAGYRSR-RELPAADEAMLPSFVFLRRLLLLAWMGSHTH-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 6EF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1301 -39342 -30.24 -142.03
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -30.24
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_6EF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6ef6-query.scw
PDB file : Tito_Scwrl_6EF6.pdb: