Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLSPDERKWLSELCH-----LKIISVQKVAHAITNRVFVLHCIDNKKFIFKRLNVQARTATQRA-----------CEYQLQQLLSKLNLTP----KVIAIKGSYKLQAFIAGE----------------------TPKEVNTDSLTLLATQLSIIHQIPTKIAPLQCLAS-ELKDLKKHSDRYVDEKEHAF-----YRQLATDLD------HSSAKDTLCHGDLSLLNIVKTASGEVQILDWEYAVLACSAYDLASCCCINQLNEADENYL----------LDHYYDLYAEHLVIDKEKLKKEYVQYLSLFRYINK---LWTDHFDKGSNSEI---------------------
3ATS Chain:A ((1-357))-TLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGLATLPGLPEVMREDDVRATYQALTGVELGDL--HWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH


General information:
TITO was launched using:
RESULT:

Template: 3ATS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1132 -34085 -30.11 -129.11
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -30.11
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.277

(partial model without unconserved sides chains):
PDB file : Tito_3ATS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ats-query.scw
PDB file : Tito_Scwrl_3ATS.pdb: