Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVSDYVDDESSVRINRKMELIKVPDESAGNAMIGISYLTREDGKIIADRIKELCNESRYNNSFWEEALYIKDKMMVSAKTVSSKDVIEINTYEQLREIDENSDQLDTDAISVICEAFKINKNDIYNITVLKKGMTNRSFLFECKGKKYIMRIPGEGTDMLINRREEAEVYNVVNKEKICDNVIYINPDNGYKITEFIENSRVCD-PFNEDDVKRCMDKLRTFHNLKLKVNHEFNILGQMKFYESLWNEKSVYDDYELTKANVLSLKKYVEDNVSEKVLTHIDAVPDNFLFAG-DEIRLIDWEYAGMHDPHVDIAXXAGMQDPHVDIAMFAIYSLYDREQTDRLIDAYFTGNCDKKTRLKIYCYIAMCGLLWSNWCEYKRQLGVEFGEYSLRQYRYAKDFYRIFINESEQIKEELK
4R78 Chain:A ((23-304))----------------------------------------------------------------------------------------------------------KIIKEKISSLLSQE-EEVLSVEQL-GGMTNQNYLAKTTNKQYIVKFFGKGTEKLINRQDEKYNLELLKDLGLDVKNYLFDIEAGIKVNEYIESAITLDSTSIKTKFDKIAPILQTIHTSAKELRGEFAPFEEIKKYESLIEEQIPYANYESVRNAVFSLEKRLADLGVDRKSCHIDLVPENFIESPQGRLYLIDWEYSSMND-------------PMWDLAALFLESEFTSQEEETFLSHYESDQ-TPVSHEKIAIYKILQDTIWSLWTVYKEEQGEDFGDYGVNRYQRAVKGLASYG-----------


General information:
TITO was launched using:
RESULT:

Template: 4R78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1349 -37011 -27.44 -132.18



3D Compatibility (PKB) : -27.44
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?

(partial model without unconserved sides chains):
PDB file : Tito_4R78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4r78-query.scw
PDB file : Tito_Scwrl_4R78.pdb: