Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAANPPRPSRSLQGKVAIVTGAGSRGETIGNGRAIALLLAEDGAKVVCVD--------------REEALAQRTAELVLAENEGASALAVAADVSSAEECARVVDAALRLFGRVDVLVNGVGVLGPPGTAVDVDAARWARGLEVNVTSMMLMAKYAVPAMRDNEPEAGVRGSIVNLGSVAGLRGGTPSLLYPTSKCAVVNMTRAMAAHHAKDGVRVNCVCPGMLYTPMVYDAEGGMSAEVREARRRRSL----LQTEG--NAWDCAGPVRFLAGGEARWITGTVLTVDAGATCALAVSMPDGE
3PGX Chain:A ((12-277))-----------SLQGRVAFITGAAR-----GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDE-TARLV--EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSW-GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI----EAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI-EPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA------------


General information:
TITO was launched using:
RESULT:

Template: 3PGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1361 -35683 -26.22 -145.05
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -26.22
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_3PGX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3pgx-query.scw
PDB file : Tito_Scwrl_3PGX.pdb: