Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------RMCILALAEKNQNPEKPSFLEDTFQEIEAPAAAMLSYGGHE----IHFELDKNCWPRLRHGSAVPSGYSAHVY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5ERX Chain:A ((22-574))NPSTTQARVVVDELIRGGVRDVVLCPGSRNAPLAFALQDADRSGRIRLHVRIDERTAGYLAIGLAIGAGAPVCVAMTSGTAVANLGPAVVEANYARVPLIVLSANYFGTQVRASISLGLAEDA--PERTSALNATWRSATCRVLAAATGARTANAGPVHFDIPLT--PPGRPAGK-PWTYTPPVTFDQPLDIDLSVDTVVISGHGAGVHPNLAALPTVAEPTAPRSGDNPLHPLALPLLRPQQVIMLGRPTLHRPVSVLLADAEVPVFALTTGPRWPDVSGNSQATGTRAVTTGAPRPAWLDRCAAMNRHAIAAVREQLAAHPLTTGLHVAAAVSHALRPGDQLVLGASNPVRDVALAGLDTRGIRVRSNRGVAGIDGTVSTAIGAALAYEGAHERTGSPDSPPRTIALIGDLTFVHDSSGLLIGPTEPIPRSLTIVVSNDNGGGDVSSRIFGTPHDVDVGALCRAYHVESRQIEVDELGPTLDQPGAGMRVLEVKADRSSLRQLHAAIKAAL


General information:
TITO was launched using:
RESULT:

Template: 5ERX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 178 7278 40.89 113.72
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 40.89
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.265

(partial model without unconserved sides chains):
PDB file : Tito_5ERX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5erx-query.scw
PDB file : Tito_Scwrl_5ERX.pdb: