Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------------------------------------------------------IFKKPVPTSCKLALTNGNKREVDAKLLPPSGTTILSDTSGAGIFTAK------VNSKCEFTSVSPALPTGFNI--EGSV------------------------------------------------------------
3E5Z Chain:A ((2-291))TLRAARPEFLDLFPAGAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA--PDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETNVRGLEH


General information:
TITO was launched using:
RESULT:

Template: 3E5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 187 -5813 -31.09 -84.25
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -31.09
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_3E5Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3e5z-query.scw
PDB file : Tito_Scwrl_3E5Z.pdb: