Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAVQMDPELAKRLFFEGATVVILNMPKGTEFGIDYNSWEVGPK--FRGVKMIPPG-IHFLHYSSVDKANPKEVGPRMGFFLSLHQRGLTVLRWSTLREEVDLSPAPESEVEAMRANLQELDQFLGPYP-YATLKKWISLTNFISEATVEKLQPENRQICAFSDVLPVLSMKHTKDRVGQNLPRCGIECKSYQEGLARLPEMKPRAGTEIRFSELPTQMFPEGATPAEITKHSMDLSYALETVLNKQFPSSPQDVLGELQFAFVCFLLGNVYEAFEHWKRLLNLLCRSEAAMMKHHTLYINLISILYHQLGEIPADFFVDIVSQDNFLTSTLQVFFSSACSIAVDATLRKKAEKFQAHLTKKFRWDFAAEPEDCAPVVVELPEGIEMG
3SBT Chain:B ((1-317))M-----------------NTVPFTSAPIEVTIGIDQYSFNVKENQPFHGIKDIPIGHVHVIHFQH-----ADNSSMRYGYWFDCRM-GNFYIQYDPKDGLYKMMEERDGAKFENIVHNFKERQMMVSYPKIDEDDTWYNLTEFVQMDKIRKIVRKDENQFSYVD----------------------------SSMTTVQENELLDPAHSLNYTVINFK-SREAIRPGHEMEDFLDKSYYLNTVMLQGIFKNSSNYFGELQFAFLNAMFFGNYGSSLQWHAMIELICSSATVP---KHMLDKLDEILYYQIKTLPEQYSDILLN-ERVWNICLYSSFQKNSLHNTEKIMENKYPELL--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1420 -51761 -36.45 -174.87
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -36.45
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_3SBT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3sbt-query.scw
PDB file : Tito_Scwrl_3SBT.pdb: