Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------MPSHLTHIWRLLKWGRTLARHGALTGIERDPLTPTPV--RRLVRVA-RLGARVPRQPRYADAFQSIG---------------------PAAIKLGQTLATRPDLVGEDAANDLLRLQDALPPVPFA-TIRAQMEQSFGRPLETLYSRFDEAPVGAASIAQ-------VHRAVTTDGRDVAVKVIRPGVIDQFNR-----DIQTYEWAAAHVEMLGGEVARLRPRLVIANMK----RWTAREL----DLRREAASASELGEAMEA------MPGYRVPAIDWDRTTGKVMTMEWIDGVKISDRDALIAAGHDVKEIAARLVNAFLRQAIAEGFFHA------DMHQGNLFVTANGDIVAIDFGIMGRIDRRARMWL-AEILYGLITGNY--RRVAEIHFEAQYVPG---HHNVEEFATALRAVG----EPMRGKPVRELSVGGMLDGLFAITRDFDMQTQP----------HLLLLQKTM----VMVEGVATALDPDINLWETSGPYVKEWLRAELGPEAKAADALIENVRILQRLPGLVKRIEEAFPEKGGAPPPPPLTEVRLIRVGSGWRYMLVALLAGLAGAGAMAAATTFL
4M59 Chain:A ((6-714))PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQ-GLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLK---PMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA---


General information:
TITO was launched using:
RESULT:

Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2305 -60936 -26.44 -120.43
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -26.44
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.183

(partial model without unconserved sides chains):
PDB file : Tito_4M59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4m59-query.scw
PDB file : Tito_Scwrl_4M59.pdb: