Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVYTKLSDEYIKNILKSYSFKKVDRIEEISEGILNTNYFVEGDKGKFIFRILEGERDYTEEVKELEFLEYLNLNGFPCPTAIKNDLGENYTFIDGKMTSVFTFIEGEKVKSINENNIKEIGQKLGKMHNLLKDRDIKRN-RKI-DMQYFYDII----SKAD----------LR-------GILKDDYDF---IMKYYERA-S-KIDY-SNLPFGIIHNDIFPDNVFMQEGEISGIIDFNDCLRGPLILDLAIVISFWIRNRGFSDEVENRLTEVFLNAYESERKITEEEKELMNEALIRIALTFIFLRVNKFHVEDNSSVNMEFKNYKDLLPLLRYF
2Q83 Chain:A ((22-303))----------LAENVLQGWDVQ-AEKIDVIQ----ALVWKVHTDSGAVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTT--G-VWDDETFNVMLNAYESRAPLTEEQKQVMFIDM----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 964 -54248 -56.27 -217.86
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -56.27
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: