Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHVPLSIHTTSYSMAAWDITTADEAWLIELCHKSADEGRQIGGQEHGGPKVVRISDRIVAKYGNIRRSELAAQEVAYHNTDRSIVHIPKVHRFFESDGQSYLFMEYVEGQTLEDVDFETHKDIPIRVANILAHLQQILGDCDSPGPVTGGEAHGYIFGDEGAGTAFDSIEDMNVYMNKRLDKMNEYLSRQEDQRRFDHLDLTPYALVLCHGDICRRNIIFESDGSLCLVDWGFAGFYPRIFELAAISYVVQNNAAFKDPIIHEFTKLLSLTD------------------KEKQDIDRFRAVRFANLRWSFRD-RRTTAEEDKFIQELYETQKRIKEEQETAGIQSFIISELLDGLLEQKSRPDLEVRHVPRPWTGSQTAIGHVKRVVVVGLDVNVASFILAMKILSSRRIFVIRTTQGSPK
1TKI Chain:A ((18-338))------KELYEKYMIAEDLGRGEFGIVHRCVETS-----------SKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN-------ILHLHESFESMEELVMIFEFISG------------------LDIFERIN----------------TSAFELNEREIVSYVHQVCEALQFLHSH---------------NIGHFDIRPENIIYQT----------RRSSTIKIIEFGQA----RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK--IERVSTKVIRTLKHRRYYHTLIKKDL-----------NMVVSAARISCGGAIRSQKGVSVAKVKVASI-


General information:
TITO was launched using:
RESULT:

Template: 1TKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1583 -74236 -46.90 -245.81
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -46.90
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_1TKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1tki-query.scw
PDB file : Tito_Scwrl_1TKI.pdb: