Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGLLTILKKMKQKERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELD------------SIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTAD
2FA9 Chain:B ((4-188))---SSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLK--------PTLHPTSEELTIAGMTFTTFDLGGGIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI--------


General information:
TITO was launched using:
RESULT:

Template: 2FA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 760 -92246 -121.38 -559.07
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -121.38
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_2FA9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2fa9-query.scw
PDB file : Tito_Scwrl_2FA9.pdb: