Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLWEPVEPEGALRERFGLLGFDGASDWVAEVLAEVWGIAVEGCDRVVISD-ANA--IVWMRTEQGRLVVKWSRAEQRFEELAASARLLGALAARGVP-VAAPVPAVDGRTRVVLGGPSGKLSVAVLPEIDGDWLDVG--DEAAVHAAGACLASLHHALAEYADADP------AVSHGATGDSGEDLRERLTKW-----LATD-DR--GVTLAASQRLAAAV----AALPPLDTREQLVHNDYRAANLLTRDSAVVGILDFDEIARQHPVHDLAKAFVYLSTLFTEWKPTAPGVRRTFLAGYESVRRLSPAEHAWLETLALWVGIQAVPTGDDPAGWAKAL
3I1A Chain:B ((4-272))--------------------QPIQAQQLIELLKVHYGIDI-HTAQFIQGGADTNAFAYQADSESKSYFIKLKYGYH----DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQL----KHFKIIAYPFIHAPNGFTQNLTGKQWKQLGKVLRQIHETSVPISIQQQLRKEIYSPK-WR--EIVRSFYNQIEFDNSDDKLTAAFKSFFNQNSAAIHRLVDTSEKLSKKIQPDLDKYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPKERDLMFIGGGVGNV-----WNKPHEIQYFYEGYGEINV----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3I1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 925 18067 19.53 73.74
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 19.53
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.271

(partial model without unconserved sides chains):
PDB file : Tito_3I1A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3i1a-query.scw
PDB file : Tito_Scwrl_3I1A.pdb: