Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDQQQIIAVAEAVLTQRYGGQQHLTEPEELSGASGTVVLRLRVANNPFLSYRSVVVKYSPQTDDPIDDAAFLREVVAYQFTTSLSEEARPGPVMLGYDLEQHAIILTDSGDGDTLATLLENS--------DEEQRIRLLRNLGTSLGKMHAGTAGAELSFNTLLARMVRARDGAREIQAMRESMLENRILDGLEIVRRAGIDVPADVADIAGTVQVH-MLHGESRAFTPFDLSPDNIIFA-D-RT-QFLDYEWAGFRDVIFDVAGVIAGFPQYISARPISEAETKVFLEAWIAEVAGVWPALQNTETLHSRITAALVGWAFFSVSLLYLDGEEPRGTTRYGGGWIMADNGNYELVQDPEALEEDVERGASVLRSPAHTDFTAVEKAIRRDIGDAFSALAWYAAAGDTPRNAVIADFASHVAERLK
5UXA Chain:A ((6-256))--------KQVIEIAK-KHNLFLKEETIQFNESGLDFQAVFAQDNN-----GIDWVLRLPRREDV---MPRTKVEKQALDLVNKYA-ISFQAPNWIIYT--EELIAYKKLD-GVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHT------PEEARMSMKQRMD-----A---VRAKF--GVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAF---------GEEGLEALILAYKEIGG---------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 946 -47379 -50.08 -198.24
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -50.08
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.202

(partial model without unconserved sides chains):
PDB file : Tito_5UXA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5uxa-query.scw
PDB file : Tito_Scwrl_5UXA.pdb: