Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVARTINLIEEEIINDLKGKFGW--HIQSLEANNLGYGNMKWIMKTDSESYFVKKYCKVRYRRGLEDV-HEALRYQDLMYRDGIPCQPVYAY-NNRYIHRLQSDEDYMITGVSKGELIQAGTANLQQMYSLGETTGRMHKWMSIHMPRRTVLH-WDLPSKHKMIARLELNLHETEE-------ANHGKYVLAIQKQMEILSGVDMDIFNECAKGWAHWDMHVDNLLFYK--DGVADIVDFDRVQFVYPDFDISRALLSCALKD---------DQMRLDAVEAYVEGYRV--HMSLSNEQLVRSIKLTW---YKEFKWVHAMYC-SE---------KTMGRF---IDEMIWIGDNWNELNDIFKL
4OCV Chain:A ((24-372))----------TNEALFDVASHFALEGTVDSIEPYGDGHINTTYLVTTDGPRYILQRMNTGIFP-DTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEI-DGGAWRVYKFIEHTMSYNLVPNPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHD---TPHRFEDFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVGELRDSITAREAELLPFSGNLLTMECGMRFLADYLEGDVYFATKYPEHNLVRSRTQIKLVREMEQRADETRAIVA-


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1465 12354 8.43 40.11
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 8.43
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: