Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYQWEPQQTLEPPLALELIREQFPDLSPVQIRVLGAGWDNTAFVINEDLIFRFPRREIAVPLLEAEWCILPKLAPR-LPLPIPIPKWRGSPASRFPWPFIGYKMLPGFTACYAN---LSEREREALAQPIARFLSHLHATPRSIISGCQIPGDNQGRIDWKQLMPK---IRKNIEELSLLSLLEKRNELEALLESLQN-LRPPMASIVVHGDFYVRHILVDEIHHFAGVIDWGDIHLGDPAIDLSVAHSF----LPFCAHEKFREAYGEIST-DTWSLALLRAIYSSTLLVLYGHHSKDPVI-LREGLRSLKIMVGK
4DCA Chain:A ((25-314))----------LDAEIYEHLNK----QIKINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQS-------DRFNIMKYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSL---FSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFR-NNRLFGVIDFGDFNVGDPDNDFLCLLDCSTDDFGKEFGRKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGYERKDREMLIKDVSELLQTQ---


General information:
TITO was launched using:
RESULT:

Template: 4DCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1148 -43676 -38.05 -158.25
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -38.05
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_4DCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4dca-query.scw
PDB file : Tito_Scwrl_4DCA.pdb: