Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGILEY-TSQLDIEFKKALGLIFKQELNLERIKQGEV-NYSYKVTSEQDIPLYHARIFRYEG-HPDTEKLLWISGELKKRNIPQARILYREKSSINFPNGFMVSNWIEGKNGWQSIKDGAYSLKNFTLETAKILLKIHEI-KVASFGWPYGKGWG---YYNTYQDRITGLPNNDEFKKLFNNDYLKRKYVLNIVSLLLKALEKIP-FPEQPILAHSDPTPDNIIVRNDRSLVLIDWDDSEGSW--WVRDYSYLRYWSDKPEEIKAGFFSGYGKIDMNESEIEIAELVEWILQSLRLLPYYKFSFADEGKYQKRMTRLKENVRQLKLLV
3JR1 Chain:A ((14-309))NLYFQGMWKSISQVLAEQFGAYYFI--KHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPL-----VYGIGNSQGHSFLLLEALNKSK----------NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDKIFVC----NPACYWGDRECDIAFSSLFEPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRY----------YNKKQSYVSLTQKLINQILHK-


General information:
TITO was launched using:
RESULT:

Template: 3JR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1419 20053 14.13 70.11
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 14.13
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.269

(partial model without unconserved sides chains):
PDB file : Tito_3JR1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3jr1-query.scw
PDB file : Tito_Scwrl_3JR1.pdb: