Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKHEKLKQLSPLLKQAISFQPMTSGFSGDRTFLVTTPSEKLVLKLSDIQKYASLKKKTSILQNLKKR-GVLCSEVMEVGVSAEQNCTFRIFPFIEGENARASIRLLTEEEQYKIGRRAGRDLRIMHTCDAPTYV------------------APWDDRVLA-KHERYVYAYQSSGVAFSHDQFVLDFIQSHADVVKERPNQFQHDDFHVGNIIIQRHQYAGVIDFDQSDWGDPIHDFYKLSLFSRESSIPFSAGQLDAYLST-QTTHDFWLLFSIYTAMSCFSSIVWTLSYDPGHVKDMVNRVERMLTDHKRFTQLTPVWYTDWLDSCV 3JR1 Chain:A ((37-309)) --------------FIKHKEKLYSGEMN-EIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNS--QGHSFLLLEALNKSKNK-----------QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSK-HNPKPSILHGNLWIENCIQVDDK-IFVCNP-ACYWGDRECDIAFSSLF-----EPFPTNFYQRYNEIYPLEEGYLERKLIYQLYYLLNFSYRYYNKKQSYVSLTQKLINQILHK--------------------

General information: TITO was launched using: RESULT: Template: 3JR1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1224 -33796 -27.61 -134.11 target 2D structure prediction score : 0.61 Monomeric hydrophicity matching model chain A : 0.62 3D Compatibility (PKB) : -27.61 2D Compatibility (Sec. Struct. Predict.) : 0.61 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.293

(partial model without unconserved sides chains): PDB file : Tito_3JR1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3jr1-query.scw PDB file : Tito_Scwrl_3JR1.pdb: