Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------EVRPITDFRLNAFNKRVPGCEFGIFYKLLDDGGTL-IGTQVERVGRSKYSWKFVPYEFAGCKWDKECNPIDK-K----------------------------------------------------------------------------
4G6Q Chain:A ((6-182))TTGQMPATSSLVDLLHHPLRWRITQLLIGRSLTTRELAELLPDVATTTLYRQVGILVKAGVLMVTAEHQVRGAVERTYTLNTQAGDADHDGVDADRLRTMFTVFVAGVGGHLDQYLEREQIDPLADGIAFRQTALNLSDEELAEFLTAFGEFLAPYVAHSPAPDRTRRVLSTILIPD


General information:
TITO was launched using:
RESULT:

Template: 4G6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 193 -268 -1.39 -3.72
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -1.39
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.199

(partial model without unconserved sides chains):
PDB file : Tito_4G6Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4g6q-query.scw
PDB file : Tito_Scwrl_4G6Q.pdb: