Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSVAGGEIRGDTGGEDTAAPGRFSFSPEPTLEDIRRLHAEFAAERDWEQF--------HQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHLARSSSRKYTELPHGAISEDQAVGPADIPCDSTGQTST
2YF4 Chain:D ((3-121))--------------------DPFTMSDLPCPPTNAERLHEFHRAIGAATPERPTPPPPELLRLRQTLLDEESAEVRAEIDHLLARQAAGEALSAGDLAPLAHELADLLYVTYGALDQLGIDADAVFAEVHRANLSKASG---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 251 -6298 -25.09 -56.73
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.62

3D Compatibility (PKB) : -25.09
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.238

(partial model without unconserved sides chains):
PDB file : Tito_2YF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2yf4-query.scw
PDB file : Tito_Scwrl_2YF4.pdb: