Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVEVNSEETVPEVLLLDLGGITFPSPIGPLLAAAESIRDPGLPRRMVSSVLWKELECGFLTIPEFCEQFAKGKAVVQEALIGWFEGLRAMEPSPRMIILLSELRLKYPGLKIGAVTNNFKHPAPLRPMRDLRGELLFDTIVESAVEGMAKGHPGGERWALV-EVWNFHDGSYMEAHIIWSSVR---------LFKTALERLDYHG-PASAVLYLDDLKHNLAQPASLGIRTRHAITPEE--ATETIRKMLALDVSSGSPLQKYLASLGVLPDSISDQARPFAWQFSFGQSNPTYLVGLIPEKPLEGYTLQKLLEEKCAVLRKQPPGELLPSAHD---VVREYTVMSELGKEGCVPVPRTLGLCTD-KTICGAAFYVMRFVTGVVFTDPNLPN------LQPYQR----------------------RKVYEDLMKTAAAVHNFPWHRSEALTQRFRGDP--SKYVSKQVERWSTQGIDVEGFKRLAKGLLDNVKISQKSPEFQSLVHGDFRLDNCIYDPHTFEVVAVLDWELSTTGNS--LVDIASALSQY--YGLYPGIAQLSSNFEELGIPKERELLDLYLRYREVESIPEGLMQYMEAFQC--------LRMAGILYGVLMRTKKGNASQQHQQAKGGSIFSMAYVTKLCTRGLELLQSRACSSSPIAVDAPSKL--------------------------------------
4M59 Chain:A ((6-714))---------PDAQVLVLAIS----SHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLP-PGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVA------PTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKARGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTEEAARCLDT-MASPNAFTYNTVMTAYGNV-GKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVSGKRGMEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG-NVAGIAAIENEVYGSGAVFPSWVILRTLVIANFK-------CRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSEVKALEAYIEDA


General information:
TITO was launched using:
RESULT:

Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2698 -90839 -33.67 -153.96
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -33.67
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.208

(partial model without unconserved sides chains):
PDB file : Tito_4M59.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4m59-query.scw
PDB file : Tito_Scwrl_4M59.pdb: