Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSGWCADAPALIARLAS-QW-----ELSLGESLPDGASSIALRCRLPD--------GTPAVLKVSPDRA---LMTEQVDMLGWFAASGRVPSVLAVDEESGAMVLEEIVPGTPAGDMP--VAPLPGQWSDLLAALHGVAPPPLPTR-----VLRGRCEEAFARVGRRLAEPAISARMDVTAWDR-AIQRCERLLNTEATTVLLHGDLHLGNVLDGGAQ------RVLMAIDPK-ACVGDPCFDAVDYVVAGAGL------------------EG-IETRCEQVAAACGL----------------DGDRLHAWSQVIAPFAAIAHLGSGGKEPLIDELLESAR
5FUT Chain:A ((9-358))----RRRAYLWCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG---GAEAMVLESVMFAILAERSLGPKLYGIFPQ--GRLEQFI-PSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLE-GRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQAKISSIEFGY-----


General information:
TITO was launched using:
RESULT:

Template: 5FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 967 -23972 -24.79 -92.20
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -24.79
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_5FUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fut-query.scw
PDB file : Tito_Scwrl_5FUT.pdb: