Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MHPTPSPDTILFASHTTATAASVAQWVERHYDLPVQQCYLIRRNLNDNYAVRAAD-GSRYVARLCAIRPRGPFNVDFEVALLAHLEAQGVG-VASPVLAANGATSVALPFPEGPRVLVLFRHCEGSVPD--TPEDLHLTGATLAQIHSAAQSYTGPASRYVLDGHHL---AGRTLDYLAAHP---E--L--A------PSVLDAYRELIHRLLGELAN------V-EDTLTRVMCHGDTHGFNNHVYSDAEGARRAAFFDFDDAGPGFLAYDLCVWLWSNLPRKAPMEPDEALLQRWQQYLAGYRAGGGHVTDADLAALPLFVQLRHLWNMGEGVARIHHWGANMMSVDWIKKQLEVMAAWARLDLPA 4PDY Chain:A ((21-306)) --------------------PLIPQAVVSKYDLAIQQR-----HADGNIEVWTDSKGRRYAAKRSSIA---PAHCRIMVQCLRHAQEQGFTKFARFVTTSSNAPYVRH----GDFTYYVTEWVSGQPANFGLPEHVAQTAYTLAQFHEATRSFRTDWK------DDVFGLFQARWRDLRQMWLGADRKREKDAFDQLLLSMRDELHRDAAESLALFEDRDVIAYLEAERSSGGWCHLDVIPSNCLYTPQH----QVVLIDFELARPAPRALDMAHLLRRSLER------GNWDGHLAYACFLHFDAV-RNIPKSEYRAVEAILRFPYLPW--------------------------------------

General information: TITO was launched using: RESULT: Template: 4PDY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1053 -27300 -25.93 -107.48 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -25.93 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.347

(partial model without unconserved sides chains): PDB file : Tito_4PDY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4pdy-query.scw PDB file : Tito_Scwrl_4PDY.pdb: