Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRDAHERLTERFEDYRIVRKLRRVPPHEVYEASVDSRRAVYKGDTGPTGNAAVEGRVTALVGRETAVPVPETLRVGDDCYVTAWHPDAPAPDSSDEADEAWAAAAGRGLATLHTETEPLVDGCGPFRAADGGVRVETADDWHAAAVDHVRHRRSVLAEYGHADVADAAVEFLRDRPDAFDGAGDPVCCHGWWTPEHVAVEDGRVACVVDFEHATAAPGEWDYWRTVTPTFAACDEDTTAARRAFRRGYESVRPFSPGFERRRPYYGLLNGVYYLQSLYVQDRHGPAATAERAARFRARIFETISELDRGRLGRTAHPSRRVAFARHTPTSVMSRFDAVLFDLDGTLCENEQDVEHLYFGAFERAEVEPFGAPSDLWAVL-----EGPPT-TPDEFEYYREGFRTVAAEHGRAEADVSAVAREFVDGIDYGAVSLLGGAEAALADAGVGHRVGLMTNGPEYRQSVKLEALGLEDAFEVVVYAGDMERRKPHTDPFDRAVEALG-VDASATLYVGNSLKYDVAGAREAGLPVAWYPDGDAD-PGSYDPDYVVESLAELADVLDGTVE
3ED5 Chain:A ((4-233))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEAD-GALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNIE--


General information:
TITO was launched using:
RESULT:

Template: 3ED5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1079 24768 22.95 111.57
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 22.95
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_3ED5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ed5-query.scw
PDB file : Tito_Scwrl_3ED5.pdb: