Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLTSSQLNSLRSLPC-FE----KVVDISLLIDGMSHTCIKVTTAL----------QVFFVKKLNSET-----AETEVLSSKYAAKHGLSPRIIYHDNAWLVTDYIVGITLDKNE-LSSSQCIDTGLTLMAKLHQLVPQPNAKTIPCLDTSESVRRLFTNPNSIPSQQ--KLFL---ADIT---ETLTLKIGIEQ---KRSDVTNIICHGDINYSNIIIDETRQSWLIDFECSHLAPVDFDLSMFIAINNI------------------SPLHIDEIVNRYMSLVP----SYK----PNKILLTYYLLYSYFINGLWYLDNTNDAK--INNHLRSLAIEQWSAFDSFVVKYHLDIPKLMPLIS
3C5I Chain:D ((13-355))--DPLYIKKICLEKVPEWNHFTEDNLRVKQIL--LTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTFNGGRIEEWLYGDPLRIDDLKNPTILIGIANVL-GKFHTLSRKRHLPEHWDRTP-CIFKMMEKWKNQLFKYKNIEKYNCDIHKYIKESDKFIKFMKV-YSKSDNLANTIVFCHNDLQENNIINTN-KCLRLIDFEYSGFNFLATDIANFFIETSIDYSVSSYPFFEIDKKKYISYENRKLFITAYLSNYLDKVVPTPKLIDEILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDFFLYAEQRLKMYDDQ----------------


General information:
TITO was launched using:
RESULT:

Template: 3C5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1095 -20485 -18.71 -73.42
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.62

3D Compatibility (PKB) : -18.71
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.279

(partial model without unconserved sides chains):
PDB file : Tito_3C5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3c5i-query.scw
PDB file : Tito_Scwrl_3C5I.pdb: