Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRQAIPWRDRSFRERFERWIEANVPNATWHVIKDTDLTYL----LVGALNEERYYAKAVTDISRGE-AGLSAFLAERHPDFVP-------DVIAIDSARNWLLMRD----IGGEALRERPDVRRY-EAALRQYAQLQRQEIDQIETYLSYGIPDRRPATLKDEIQTYLPELCAGLDRHQAEAM---LALQDELLTMCDELATGMPMSLEHGDLHGGNIFWRERTNDLCILDWGDATVTHPFFSVRVFWNALYDLLPEEDEVAWYKQIQTMRTVYLEAWSGVAPKDVLWRHLLIAEELGCV----YRALSWHVYVTRYRYDVAESSDKPAQWLNFLLEYRDLKR---RFP----
3GLF Chain:E ((1-334))MRWY-----PWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRS--RCRLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPGAALA-LFQGDNWQARETLCQALAYSVPSGD-----------WYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL


General information:
TITO was launched using:
RESULT:

Template: 3GLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1377 -42408 -30.80 -139.96
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain E : 0.67

3D Compatibility (PKB) : -30.80
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.288

(partial model without unconserved sides chains):
PDB file : Tito_3GLF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3glf-query.scw
PDB file : Tito_Scwrl_3GLF.pdb: