Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceIFKKPVPTSCKLALTNGNKREVDAKLLPPSGTTILSD-------TSGAGIFTAKVNSKCEFTSVS----PALPTGFNIEGSV-----------------
5DHD Chain:A ((3-100))-FVKPGSLSVKVTDWGNTEYDVTLNLGGTYDWVVKVKLKDGSSVSSFWSANKAEEGGYVVFTPVSWNRGPTATFGFIATGSESVEAIYLYVDGQLWDAW


General information:
TITO was launched using:
RESULT:

Template: 5DHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 197 268 1.36 3.82
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 1.36
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.233

(partial model without unconserved sides chains):
PDB file : Tito_5DHD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5dhd-query.scw
PDB file : Tito_Scwrl_5DHD.pdb: