Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MSVVPPNRSQTGWPRGVTQFGNKYIQQTKPLTLERTINLY---------PLTNYTFGTKEPLYEKDSSVAARFQRMREEFDK-IGMRRTVEGVLIVHEH--RLPHVLLLQLGTTFFKLPGGELNPGE-DEVEGLKRLMTEILGRQDGV--LQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
1QWT Chain:A ((17-255))ENPLKRLLVPGEEWEFEVTAFYRGRQVFQQTISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSL-TDRGVMSYVRHVLSCLGGGLALWRAGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLITFTEGSGRSPRYALWFCVGESW-PQDQPWTKRLVMVKVVP--TCLRALVEMARVGGASSLENTVDLHISNSHPLSLTSDQYKAYLQDLVEGMDFQGPGES


General information:
TITO was launched using:
RESULT:

Template: 1QWT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1144 -5289 -4.62 -23.72
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -4.62
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.225

(partial model without unconserved sides chains):
PDB file : Tito_1QWT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1qwt-query.scw
PDB file : Tito_Scwrl_1QWT.pdb: