Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMEFQL-DQEWRLRPI-KGDTGKTYIGMRD-EDKVFIKRNTTP-----------MLAALSREGI---TPKLVWTKRTGNGDTLTAQEWLEGRLLTPNE----------------IGQRNDVIDVLYHLHHSNSLKTMLTRIGGRVMTPEKMLQKYEKELPEELQKNQFLQIVHRFLREQIP--SIDKENLSVVHGDVNHRNWLVC-KNYL-YLVDWDSIMFADPAVDIATILGNYVPLSSWNQWLISYGIRPT---DEMLEKFHWYAAMNLLQEITRYCKREDHRRMNEEILQLKRIFSG
5IWU Chain:A ((14-298))--KHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVMPRTKVEKQALDLVNKYAISFQAPNWIIYT-----EELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDL--VVHTPEEARMSMKQRMDAVRAKFGVGENLWNRWQAWLNDDDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAF-GEEGLEALILAYKEIGGYYWPKMKEHIIELNAAYPVSIAEFALVSGIEEYEQMAKEALE-----


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1041 37580 36.10 153.39
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 36.10
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: