Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSVYTPLSLDEVRTFAAPYGL--EVLELNPIQGGIQNTNYFLVDVNRKQYVLTVFEELDA---QG-AGELIPVLEQLGTHDVPVAVPLKH-SGQAVHFIAGKPAQIAPRLMGHHPMQ--TTVAQVAAIADAQAKLHVALQDFPLERE--YRRDHQYWTGVAEQLKPNMT-------QDDQTLLEQVYQAFNA---KTA--QYSNRPTGFIHSDLFRDNTLFEG--EQLQGILDFYELNQDELLFDIAITINDFCTEYPA-------AHLNSDKVGAYLEAYQK--VRALTSDELECLDVFLAMAACRFWSMRLQVAQKNKEEGRTGDDILQKDPQEMRAMMQDRLSHVKA
4WH3 Chain:A ((4-299))-------SNEVLFGIASHFALEGAVTGIEPYGDGHINTTYLVTT-DGPRYILQQMNTSIFPDTVNLMRNVELVTSTLKAQGKETLDIVPTTSGATWAEIDGGAWRVYKFIEHTVSYNLVPNPDVFREAGSAFGDFQNFLSEFDASQLTETIAHFHDTPHRFEDFKAALAADKLGRAAACQPEIDFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDEKDLSKVHFSTELFRAYTEGFVGELRGSITAREAELLPFSGNLL----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1077 -2361 -2.19 -9.01
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -2.19
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.371

(partial model without unconserved sides chains):
PDB file : Tito_4WH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4wh3-query.scw
PDB file : Tito_Scwrl_4WH3.pdb: