Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFENESMGFNHDEICATWNIP-PLVSVQKPLTGTIHNVFLLTTR-EAKYVLRIYSYPP-EKRFRIVNEHAIARYVQSHHLP--AIAPLPISSGCETFLERDGHFYALYPFAQGEQLSRAMLNS--------NQSHVGEIISAMGHSLAEVHLVLSSYCLPTT-RPLS-LVVNREQTIAKIEELEIVIPAKEALDDLDQRVLSALRARKQYLLTASDVDVSELNALPWQPLHGDFQETNLFFS-HGRVSAIIDWDQACSGPRAWEILRTLHYVFALDPSRCQRFLEAYQQVFPLPMEVLHLTAKVYTWVQLNNLWGWRSYYLDNNQSLRQLLSTSDSQPFTTRWAQLAKML
5IWU Chain:A ((2-260))-----SKDIKQVIEIAKKHNLFLKEETIQFNESGLDFQAVFAQDNNGIDWVLRLPRREDVMPR--TKVEKQALDLVNKYAISFQAPNWIIY-----------TEELIAYKKLDGVPAGTIDHNIGNYIWEIDINNVPELFHKSLGRVLAELHSIPSNKAAALDLVVHTPEEA-RMSMKQRMDAVRAKF-------GVGENLWNRWQAWL----ND-----DDMWPKKTGLIHGDVHAGHTMIDKDANVTGLIDWTEAKVTDVSHDFIFNYRAF---GEEGLEALILAYKEIGGYYWP------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 997 -30169 -30.26 -124.15
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -30.26
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_5IWU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5iwu-query.scw
PDB file : Tito_Scwrl_5IWU.pdb: