Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLTDPPSLGTAQAASVIAAAVRLLTKRTGAEVTLVEVEDLGGTGQTLVVRARVGENPFSLPRTLVIKQTPPQGSREMFTREVVSYQFTTSLATGDRPGPELLAWDSEERVLIISDLGEATPMSQVLASQSGGEENALMAWAQRLGRMHAATAGREIDFAALLRRAKVPPSRDIIGQQVQGAVLALPRQLREQLSLETPEEVRAIAAKAKELFDKGTMRAFSPADPGPDNILLTADQGVRFLDYEWGGFRDATLDIAYALVTYRGAMRKEESKEYWSELDQRIVQAWRAEAVAVWPALADDVTLQKRVLGAMLIWVWLTTAWWLPGHGRDGAWSHRHSLSTPTPQALMARWEGLLGLANAAGDLAVAEHAETVIAALRAAWRW
2Q4L Chain:A ((23-351))PELRKDPVTNRWVIFSPFKSKSCPFCIGREQ-------------ECAPELFRVPDHDPNW---KLRVIENLYPALSRNLETRTIVGFGFHDVVIESPVHSIQLSDID------------------------PVGIGDILIAYKKRINQIAQHD---SINYIQVFKNQG--ASAGASMSHSHSQMMALPV---------VPPTVSSRLDGTKDYFEETGKCCLCEAKSKH----FVIDESSHFVSVAPFA---ATYPFEIWIIPKDHSSH-------FHHLD-------DVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTS---PLKVTESQLPYTHWFLQIVPQ-----LSGVGGFEIGTGCYINPVFPEDVAKVMREVSLT


General information:
TITO was launched using:
RESULT:

Template: 2Q4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1615 -120811 -74.81 -401.36
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -74.81
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.208

(partial model without unconserved sides chains):
PDB file : Tito_2Q4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q4l-query.scw
PDB file : Tito_Scwrl_2Q4L.pdb: