Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKAGAADSAPTPKPQDGPARAWVARLVQRRFGERPRGLQALGGGLNNHVYQLQAGGQPLVVRLHQDPGKLAVYRKEAWAMGQARKAGVPTPQVLEVGEE-GGHPYMLQRLVEGIPGTQ--WADGNAVLRQMGELAARLHQVATQGFG-PAVGGSAVPGQRSWPHWADFLDHELRVGER-LGMLDRVNALPTPARQA-LTATLAQMRRWSRRPVLQHGDLRLKNVIVSPRDGRIVALIDWEDCLSAPPPHWELAIALHDLG-PDGKEVFLEGYGLSAARFARIAPQLRALNVLNYAWAIHLALQDGQRRRAEWMKARLRGVFDVAL
3W0S Chain:A ((6-274))------------------LTATSVEKFLIEKFD-SVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPF-GPQ-GIGQYTTWRDFICAIADPHVYHWQTVMDDTV-S-ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTD-N-GRITAVIDWSEAMFG-DSQYEVANIFFWRPWLACMEQQTRYFERRHPE---L-AGSPRLRAYMLRIGLDQL------------------------


General information:
TITO was launched using:
RESULT:

Template: 3W0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1209 -48427 -40.06 -184.83
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -40.06
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.340

(partial model without unconserved sides chains):
PDB file : Tito_3W0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3w0s-query.scw
PDB file : Tito_Scwrl_3W0S.pdb: