Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQDEQVRAWLERELDG-TVVAFERQ--ERWRAAWFAELKNQGELRSYYVRGHRGGNFREMITLGQEADINRVLHRH-GVPVPRVHGMID---DPPAIVMDRLPGRVNLATA---LDDAEREAVLDQYVDAMCRMHAIDVNEFGALGLPVPADNRAAALNMYATGERNYRRA--KTAPSPMIEFMWRWLCR---NVPAGRTQQGLIQADAA--QFLFEQ----GRMTGLIDFEAAYIGDPIAEFAAMRSRDCEEPLGDIGRIARRYEAVTGEPVDRDAVEFHTAGWSLMTPFQWEDSVRNPAPGDSWLEYFTWLVGCGRWALEAIAAVAGAPLPTVEAPAQRPSSYSSAAYTNLMSLLDEWPTASAYEGFRADSARAVTRFAEHVHAFGADLEGAAVEEISELLGTRQPDLATAEAALEQFVLRASPDLDVALVQYFHRWTQRQQFLIAGTGARHEKLIHLSLQPLTADAWQAEGQSRRHA
3TDW Chain:A ((4-278))--NKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILV---N----GDWVFRFPKSQQG--ADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVP-VTNLKN----KILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDCG----ELFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1077 3829 3.55 15.07
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 3.55
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_3TDW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3tdw-query.scw
PDB file : Tito_Scwrl_3TDW.pdb: