Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNWSFGIDNDKLIGLVLEGKKTATSSLYNFDKIPVIGKESIIHFDNEKDACIVETVDYKIIKYNEMTEELAKLEGEGDLSLNYWKQVHLNFFKSVNPNFKEDDKIIFEIFKVTKNLVEERLKLGKSIASKNTDLLGNIVKVEEINSGFNNTLFNINDKYVIKVCTNKELENTFENEKD---FYLSNKDNCFIPKLYKYDDSKVDCDYIYEVIEKIKGKTLYYYWYKMNEADREKTIEKLIDIIKKFHSVNGKEYDWKNKIKGEIKNRIIKCKKYFKIKDYNMILESIDKYDEYLSDNKFALIHNDLHFDNVIYNNGKLTIIDFNDSIQAPIDFEFRLLYMCQEQPWKWADI----------EMDPYQKPEDYKNIWNYIKKYYKELNEIKFLEQRMIIYRIWNDTGHLKKYHNVELTKGIVENSKKLI
3GLG Chain:E ((1-334))MRWYPWLRPDFEKLVASYQAGRGHHALLIQA--LPGMG----------DDALIYALSRYLLCQ-----------QPQGHKSCG-----HCRGCQLMQAGTHPD------YYTLAPE--KGKNTLGVDAVREVTEKLNEHARLG------GAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATRE-------------------PERLLATLRSRCRLHYL-------APPPEQYAVTWLSREVTMSQDALLAALRLSA---GSPGAALALFQGDNWQARETLCQALAYSVPSGDWYSLLAALN----------------HEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQ-------PGVVLPVPHL-


General information:
TITO was launched using:
RESULT:

Template: 3GLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1486 -32439 -21.83 -101.05
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain E : 0.66

3D Compatibility (PKB) : -21.83
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.200

(partial model without unconserved sides chains):
PDB file : Tito_3GLG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3glg-query.scw
PDB file : Tito_Scwrl_3GLG.pdb: