Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAVRVLVASRLAAASAFTSLSPGGRTPSQRAALHLSVPRPAARVALVLSGCGVYDGTEIHEASAILVHLSRGGAEVQIFAPDVPQMHVIDHTKGQPSEGESRNVLTESARIARGKITDLANLSAANHDAAIFPGGFGAAKNLSTFAVDGKDCKVNKEVERVLKEFHQAGKPIGLCCIAPVLAAKVLRGVEVTVGHEQEEGGKWPYAGTAEAIKALGAKHCVKEVVEAHVDQKNKVVTTPAFMCETALHYIHDGIGAMVRKVLELTGK---
1OY1 Chain:A ((5-224))------------------------------------------KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEATE--TRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQ-AHQAGKPLGFC-IAPALPKIFDFPLRLTIGTD----------IDTAEVLEEGAEHVPCPVDDIVVDEDNKIVTTPAYLAQN-IAEAASGIDKLVSRVLVLAELEHH


General information:
TITO was launched using:
RESULT:

Template: 1OY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1353 -46102 -34.07 -218.49
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -34.07
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.250

(partial model without unconserved sides chains):
PDB file : Tito_1OY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1oy1-query.scw
PDB file : Tito_Scwrl_1OY1.pdb: