Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------MEPSLDMITDESLRTAAAIDFVCQHFS----LGELVGIGDRLKGSYNINLKIT--TTNGEFVVRFISSSVSEAHLQYVSKLLAKLENEGIPVPLPVQDEKGMSFVELDGKRV---QVTPFVQGRSFLCREQQVHSSASMLRRFHHILGDEPPGPLPEWSFYHKSSDLRERLNRLRELPTIPSKEHAEVSRV-MNRVLHKYDKDASLL-----PRTIIHGDWHFWNQKYIRNEVS--CVLDFDFVRNGTRLFDIAYSIWVIYLLLPNYA----STFDASFLDGY-GKLSDIEIYLLPAAVS----RISLFFLCQSIHSADPAVKWKHQYRKQMPFLDWMEKEGKSRIRSLASAVQA
2QG7 Chain:A ((50-458))YPITESNLRILEGEDRSEKAKELLKKYVSNVFENEKTLYIYCKYVMLHYGKDLVNPNEVDSLEFQIINGTNILIKVKDMSKQAKYLIRLYGPTDEIINREREKKISCILYNKNIAKKIYVFFTNGRIEEFMDGYALSREDIKNPKFQKLIAKNLKLLHDIKLNENLYKELQVTQKVPGTRPSFLWNTIWKYFHLLNEERKKICSFDAKANILKLIDFDVLRDSIVEVESLCKRENSPIVLCHCDLLSSNIINTVGEGDSISFIDFEYSCPMERAYDIANHFNEYAGFNCDWDLTPSKEEEYHFIMHYLGTDDEELINQLIREIQPFYICSHINWGLWSLLQGMHSFDFINYGMTRLTA--SCLPIFRSKV---------


General information:
TITO was launched using:
RESULT:

Template: 2QG7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1315 16667 12.67 52.41
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 12.67
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.275

(partial model without unconserved sides chains):
PDB file : Tito_2QG7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2qg7-query.scw
PDB file : Tito_Scwrl_2QG7.pdb: