Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------------------------------------------------------------------------------------------------------EQARYHGQCVVEIYNSQNQRADILHSQIWMRETLPDYTLHPLSRYAVLV--DGDCNARAEYGIAPPGNTFRGCTAYE----------------------------------------------------------------------------------------
5FQN Chain:A ((73-401))LYYECDVSVHEEMIADQVRTEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRLNGLEDRVHVLPGPVETVELPERVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFVAPISDQMLEWRLGFWSQVKQHYGVDMSCMESFATRCLMGHSEIVVQDLSGEDVLARPQRFAQLELARAGLEQELEAGV---GGRFR-CSCYGSAPLHGFAVWFQVTFPGPLVLSTSPLHPATHWKQALLYLNEPVPVEQDTDISGEITLLPSPDNPRRLRILLRYKVGDHEEKTKDFAME


General information:
TITO was launched using:
RESULT:

Template: 5FQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 206 -7101 -34.47 -100.01
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -34.47
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.113

(partial model without unconserved sides chains):
PDB file : Tito_5FQN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5fqn-query.scw
PDB file : Tito_Scwrl_5FQN.pdb: