Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASAARPIRDYLPGLLVLAGGLYTVYYYYMYWIRVYGALCLPGYGDPVKVEVTQGIWIRLDAILFPTVFGVILALLGVMLVWKKKFGAAVVALVLSATVINWPAFIMIAGGALLGLLFWRKTLLPTIDLPDETMEWVDAEAGLSVLKSFRRLPSERLAYSFHNEGGGRFVVKETSSAESAERETRVLNAAAENGLPAPEAKATDGRFLLMPQLDGFPFLQPLDFEAWTDEIAGILTTTHSAPKPDMKARRRPAEPVIPDRAFDRANWERAARIFREETADAVPVFVHGDFEPANVLFSGGRATGLTGWDHAGSGPAQLDVGRMRVALELIHGGNVADRFLAKYKNLSKDRSFRYSRYWDLLAVYGWLEQDPGSIASHWRRFGITTLSEDEVMRRLERFVKTLTDKE--
4P0P Chain:B ((62-389))RMKAQRP------------------------------------------EECLKHIIVVLDPVLL------------------QMEGGGQLLGALQTM----ECRCVIEAQAVPCSVTWRRRAGPSEDRED----WVEEPTVLVLLR------AEAFVSMIDNG---------------KTLQGFVTDITAKTA----------GKALSLVIVD--------QEKCFVSRVDAEEALVDLQLHTEAQAQIVQSWKELADFTCAFTKAVAEAPFKKLRDETTFSFCLESDWAGGVKVDLAGRGLALV-WRRQIQQLNRVS---LEMASAVVNAYPSPQLLVQAYQQCFSDKERQ-----NLLA--------DIQVRRTSRRIG------PELSRRIYLQMTTLQPHLSL


General information:
TITO was launched using:
RESULT:

Template: 4P0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1046 -123813 -118.37 -448.60
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -118.37
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.151

(partial model without unconserved sides chains):
PDB file : Tito_4P0P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4p0p-query.scw
PDB file : Tito_Scwrl_4P0P.pdb: