Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEKDRAVVTELLQKAGREDFIPLQENQLAGDGSSRRFYRLASGGETLIAVLPAGEEAKDRAES-RAAYHIGGYLLACGTPVPAIYGWD--------EASGGLLFQDLGNTRLQDVAHTEEGRQLYRQLVRALAGMNCRARGIDSSWC--WDSPCY--DRSLMLERESGYFLRAFWQGLLG-QEVPIGLAEEFSSLA---DAVS-LYSTDFFLHRDFQSRNIMIHA---GRPSIIDFQGGRRGPLGYDLASLLYDPYV------------DLDEDFRALLWEDYLAALGAQIDISREDFAKQYSLLACQRSLQIIGAFSWLSAVAKKTFFVQFIRPSLLNLEKILSAPYYQNYRVLRQTVRRGLSLYR
4OCV Chain:A ((24-298))----TNEALFDVASHFALEG-TVDSIEPYGDGHIN-TTYLVTTDGPRYILQRMNTGIFPDTVNLMRNVELVTSTLKAQGKETLDIVRTTSGDTWAEIDGGAWRVYKFIEHTMSYNLVP---NPDVFREAGRAFGDFQNFLSGFDANQLTETIAHFHDTPHRFE--DFKKALAADELGRAAGCGPEIEFYLSHADQYAVVMDGLRDGSIPLRVTHNDTKLNNILMDATTGKARAIIDLDTIMPGSMLFDFGDSIRFGASTALEDERDLDKVHFSTELFRAYTEGFVG----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 990 -36613 -36.98 -151.29
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -36.98
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.219

(partial model without unconserved sides chains):
PDB file : Tito_4OCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ocv-query.scw
PDB file : Tito_Scwrl_4OCV.pdb: