Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLEPWLHRYWNIGPARMQALASGHTNKTYLVECDAGRAVLRVSWSGKPVGQVDREAAILGHLGETRAAPMLPALPRLRPTVDAQSGVRLPDGSWLHLFEHIDGSP-GLPPEAETGAIDAMRALAHLHAALAAIPVTES----APLAWLSARHA----RVAARA-------APPL----PGNLSDRYGTMIRRIGAHLD----AAARWLTGTVHWLHGDYHAGNLLYVGGAVNGVLDFDDVGQGAQWLEAAFALFALSRDAGRDDRFVFDARRWDAGLQAYAATRPDAVPDWMHDHRDALMALFCADQTLIHLEAAQRGLWVPGPGIGFLGGWRQLLDGAAP
2Q83 Chain:A ((24-290))----ENVLQGWDVQ-AEKIDVIQ----ALVWKVHTDSGAVCLKRIHRP--EKKALFSIFAQDYLAK----KGMN-VPGILPNKKGSLYSKH-GSFLFVVYDWIEGRPFELTVKQDLEFI--MKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDLPIRDLRKMIIPLLDTTG-----VWDDETFNVMLNAYESRAP--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2Q83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 938 -23895 -25.47 -99.98
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -25.47
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.284

(partial model without unconserved sides chains):
PDB file : Tito_2Q83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2q83-query.scw
PDB file : Tito_Scwrl_2Q83.pdb: