Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-AQKICHFTILKMYKNTWTFVRKDSAPADQTTTIEGIKVFFSKDCIPQHDY
1YTF Chain:C ((34-79))ENLMLCLYDKVTRTKARWKCSLKD-----GVVTINRNDYTFQKAQVEAEWV


General information:
TITO was launched using:
RESULT:

Template: 1YTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 125 -3003 -24.02 -66.72
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : -24.02
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.100

(partial model without unconserved sides chains):
PDB file : Tito_1YTF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ytf-query.scw
PDB file : Tito_Scwrl_1YTF.pdb: