Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------PQPSDGLRRTWEEARENDCEVRIFSDKVNKYIQPLDRFFITPGLETHYIINAGGVQYPVSFLAPKGCEAAITGKLPPTYGV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2GSA Chain:A ((6-432))FKTIKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYTG-RDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRIAYGGVQEKFGVTPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFEAGFTSLAHTEEDIDATLAAARTVMSAL


General information:
TITO was launched using:
RESULT:

Template: 2GSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 219 -6263 -28.60 -78.28
target 2D structure prediction score : 0.83
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -28.60
2D Compatibility (Sec. Struct. Predict.) : 0.83
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.218

(partial model without unconserved sides chains):
PDB file : Tito_2GSA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2gsa-query.scw
PDB file : Tito_Scwrl_2GSA.pdb: