Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWD-SPVTH------REH------RPAPSPPQRCKVEFGRANKPIGQAIEYWDRD---FIIQG------YTFHCYADCTLKGDYNFPRNQGYWVTS---
1J8K Chain:A ((1-94))-NIDRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVA---LHDDMESQPLIGTQSTAIPA


General information:
TITO was launched using:
RESULT:

Template: 1J8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 210 12651 60.24 183.35
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 60.24
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.204

(partial model without unconserved sides chains):
PDB file : Tito_1J8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1j8k-query.scw
PDB file : Tito_Scwrl_1J8K.pdb: